New Paper: The Hygiene Hypothesis, the COVID Pandemic, and Consequences for the Human Microbiome

Congratulations to our Platform 1 Co-Lead Dr. Philippe Gros on this recent publication!

A perspective from the Canadian Institute for Advanced Research (CIFAR) on the impact of the environment related to the COVID pandemic and its effects on the human microbiome. Explore many facets of COVID-19−induced societal changes and their possible effects on the microbiome, and discuss current and future challenges regarding the interplay between this pandemic and the microbiome.

Abstract

The COVID-19 pandemic has the potential to affect the human microbiome in infected and uninfected individuals, having a substantial impact on human health over the long term. This pandemic intersects with a decades-long decline in microbial diversity and ancestral microbes due to hygiene, antibiotics, and urban living (the hygiene hypothesis). High-risk groups succumbing to COVID-19 include those with preexisting conditions, such as diabetes and obesity, which are also associated with microbiome abnormalities. Current pandemic control measures and practices will have broad, uneven, and potentially long-term effects for the human microbiome across the planet, given the implementation of physical separation, extensive hygiene, travel barriers, and other measures that influence overall microbial loss and inability for reinoculation. Although much remains uncertain or unknown about the virus and its consequences, implementing pandemic control practices could significantly affect the microbiome. In this Perspective, we explore many facets of COVID-19−induced societal changes and their possible effects on the microbiome, and discuss current and future challenges regarding the interplay between this pandemic and the microbiome. Recent recognition of the microbiome’s influence on human health makes it critical to consider both how the microbiome, shaped by biosocial processes, affects susceptibility to the coronavirus and, conversely, how COVID-19 disease and prevention measures may affect the microbiome. This knowledge may prove key in prevention and treatment, and long-term biological and social outcomes of this pandemic.

Look at @markhamh covers of this paper in the New York Time @nytimes
It’s Going to Be Weird, but We Need to Learn to Live With Germs Again

Publication: The hygiene hypothesis, the COVID pandemic, and consequences for the human microbiome. Finlay BB, Amato KR, Azad MB, Blaser MJ, Bosch TCG, Chu H, Dominguez-Bello MG, Ehrlich SD, Elinav E, Geva-Zatorsky N, Gros P, Guillemin K, Keck F, Korem T, McFall-Ngai M, Melby MK, Nichter M, Pettersson S, Poinar H, Rees T, Tropini C, Zhao L, Gilles-Vernick T. PNAS. 20 January 2021.